Open source

ToppGene Suite

Associated institutions: 

Cincinnati Children's Hospital Medical Center
University of Cincinnati

Type of resource: 

Software

BioEnEx (Bio-entity Extractor)

Associated institutions: 

FBK-irst
University of Trento

Type of resource: 

Software

Date of latest version: 

April 4, 2012

Chest X-Ray Device Extractor

Associated institutions: 

VA CHIR/VINCI
Veterans Affairs Palo Alto Health Care System
Stanford University

Type of resource: 

Software

Date of latest version: 

March 1, 2011

The University of Pittsburgh Pharmacokinetic Drug-drug Interaction (PK DDI) Package Insert Corpus

Associated institutions: 

University of Pittsburgh

Type of resource: 

Data set

Date of latest version: 

November 1, 2011

Corpus for Evidence Based Medicine Query-based Summarisation

Associated institutions: 

Macquarie University

Type of resource: 

Data set

ABNER

Associated institutions: 

University of Wisconsin-Madison

Type of resource: 

Software

MTI ML (Machine Learning Package)

Associated institutions: 

U. S. National Library of Medicine

Type of resource: 

Software
Data set
Other

Date of latest version: 

November 30, 2011

MetaMap Java API

Associated institutions: 

U. S. National Library of Medicine

Type of resource: 

Software

Date of latest version: 

August 30, 2011

MetaMap UIMA Annotator

Associated institutions: 

U. S. National Library of Medicine

Type of resource: 

Software

Date of latest version: 

August 30, 2011

NeuroLex - A dynamic lexicon of neuroscience terms

Associated institutions: 

University of California San Diego

Type of resource: 

Data set
Online community
Data model or schema
Knowledge base